The years listed on Netflix are often wrong, so it is impossible to figure out the correct order to watch them just by looking at the listings on Netflix.
Titles without links aren't available at Netflix because they haven't been released in Region 1 yet, but likely will be within the next year.
There were a couple movies made in 1965/66 with Peter Cushing, but they only have a vague similarity to the TV series. Most Doctor Who fans ignore their existence.
This list is fantastic, baff! I tried creating my own list on Netflix and it was just too difficult to get them all in the right order. You've saved me months worth of work.
PS: If I remember correctly, the discs for "The Beginning" are numbered wrong.
Still no release date for the Christmas special "Doctor Who: The Next Doctor". It will air on BBC America this weekend. The Easter special (1st Doctor Who filmed in HD) will air next month followed shortly by the dvd/blu-ray release.
BBC America HD launches on July 20th and they will air the Torchwood mini-series Children of Earth all that week. It will also be released on dvd/blu-ray shortly after.
This is a list of current and upcoming dvds available at Netflix, not a complete list of every episode. The McGann movie has so far only been released on dvd in the UK (8 years ago) and Netflix doesn't carry it. Due to licensing issues it may never get released in the US.